Genomic and Applied Microbiology

Software (in-house developments)

ClassiPhage

ClassiPhage is a method under active development for phage taxonomic classification.

Files for download

CutSPR

CutSPR is a tool that assists the construction of a mutagenesis vector based on the pJoe8999 plasmid system.    Binaries (64 bit):

TraV - Transcriptome Viewer

ECFfinder - ECF-Sigma-factor identification tool

Download the In order to use the ECFfinder, please ensure that your firewall allows full access to port 8080.

YACOP - Enhanced gene prediction obtained by a combination of existing methods

secureBLAST - Controlled access to wwwBLAST